From: Toll-like receptor 9 interaction with CpG ODN – An in silico analysis approach
Amino acid | Atoms | Nucleotide | Atoms |
---|---|---|---|
TYR224 | CZ | C8 | C3′ |
VAL248 | CG1 | C8 | C5′ |
VAL290 | CG2 | G9 | C5′ |
VAL312 | CB | G6 | C2 |
VAL312 | CG1 | C8 | C5′ |
VAL312 | CG2 | A7 | C2 |
ASP314 | CB | G9 | C5′ |
ARG337 | CD,CZ | A4 | C2,C5,C6 |
ARG337 | CZ | T5 | C2 |
ARG337 | CB,CZ | G6 | C2,C4,C5,C6 |
LYS338 | CD | A7 | C2 |
LYS338 | CD,CE | C8 | C2 |
LYS338 | CE | G9 | C2 |
ASN340 | CG | T10 | C5′ |
VAL364 | CG1 | C3 | C5 |
ALA365 | CB | A4 | C6 |
LYS367 | CE | T5 | C4,C5 |
MET392 | CE | C3 | C2′,C3′ |
ARG397 | CZ | T11 | C5′ |