Table 1 Hydrogen bond interactions observed in the complex between BV gD- human nectin-1 complex
From: Herpes B virus gD interaction with its human receptor - an in silico analysis approach
Donor atom | Acceptor atom | Distance | Angle XDA | Angle DAY |
|---|---|---|---|---|
NECTIN-1:Glu64:NE2 | BV gD:Pro222:O | 2.93 | 92.97 | 123.59 |
BV gD:Arg223:NH2 | NECTIN-1:Glu125:OE1 | 2.75 | 113.59 | 129.92 |
NECTIN-1:Asn77:ND2 | BV gD:Asp216:O | 2.56 | 100.66 | 114.01 |
NECTIN-1:Asn77:N | BV gD:Asp216:O | 2.55 | 100.17 | 157.59 |