Table 4 Hydrogen bond interactions observed in the complex between BV gD- monkey nectin-1 complex
From: Herpes B virus gD interaction with its human receptor - an in silico analysis approach
Donor atom | Acceptor atom | Distance | Angle XDA | Angle DAY |
|---|---|---|---|---|
Nectin-1:Gln64:NE2 | BV gD:Pro222:O | 3.04 | 65.30 | 129.98 |
Nectin-1:Asn80:N | BV gD:Asp216:O | 2.47 | 108.92 | 155.88 |
Nectin-1:Asn80:ND2 | BV gD:Met220:O | 3.08 | 158.26 | 109.72 |
BV gD:Tyr38:OH | Nectin-1:Gly89:O | 3.07 | 118.93 | 129.15 |
BV gD:Arg223:NH2 | Nectin-1:Glu128:OE2 | 2.91 | 120.46 | 134.88 |