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Table 4 Estimates of variant allele frequency, pSNPs stands for polymorphic loci.

From: Seeking genetic signature of radiosensitivity - a novel method for data analysis in case of small sample sizes

Chr.

No. of SNPs

No. of pSNPs

pSNPs variant freq [%]

Overal Variant Freq [%]

Chr.

No. of SNPs

No. of pSNPs

pSNPs variant freq [%]

Overal Variant Freq [%]

1

694366

341063

22.62

11.11

11

258748

146431

21.39

12.11

2

520483

262264

19.99

10.07

12

395053

198106

20.62

10.34

3

507286

229264

23.42

10.59

13

397581

181873

20.01

9.16

4

476118

219418

21.97

10.13

14

345482

213003

20.98

12.94

5

494216

211104

21.05

8.99

15

337079

150984

20.91

9.37

6

508735

232322

20.74

9.47

16

304953

114988

19.99

7.54

7

405410

207630

19.50

9.99

17

265557

135794

21.48

10.98

8

444234

218490

18.36

9.03

18

289416

119201

21.14

8.71

9

361325

183990

17.64

8.89

19

221786

94203

20.53

8.72

10

398909

124856

20.10

6.34

X

222912

44286

24.91

4.95