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Table 3 The rest of common pathways associated to up or down-regulated genes in both cancer cell lines.

From: Pathway landscapes and epigenetic regulation in breast cancer and melanoma cell lines

Gene expression

Pathway name

Genes

p-value

q-value

Up-BC

P53 signaling pathway

ATM; MDM2; PPM1D; APAF1; TP73

2.01E-03

4.56E-02

Down-melanoma

 

TNFRSF10B; MDM2; CASP8; BAI1

7.57E-04

4.12E-02

 

Pathways in cancer

CDKN2B; CEBPA; CASP8; AR; FGF12; MDM2; FGF20

3.65E-03

1.33E-02

Up-BC

 

PGF; PTGS2; CEBPA; TGFB3; WNT1; JUN; DCC; STAT5B; CSF2RA; WNT2B; MDM2; RAF1; PAX8; IL8

1.05E-04

9.17E-03

Up-melanoma

Regulation of insulin-like growth factor (IGF) transport and uptake by IGFBPs

IGF2; IGFBP6

7.77E-03

4.09E-02

Down-BC

 

IGFBP1; MMP2

8.00E-03

9.59E-02