Table 1 Errors in reproduced metabolite concentrations obtained by using estimated enzyme reaction rates
From: Distinguishing enzymes using metabolome data for the hybrid dynamic/static method
E. coli | S.cerevisiae | ||
|---|---|---|---|
Metabolite | Error (%) | Metabolite | Error (%) |
G6P | 5.14 × 10-1 | Glc | 1.24 × 10-1 |
F6P | 2.79 | G6P | 6.35 × 10-2 |
FDP | 1.21 | F6P | 6.46 × 10-2 |
DHAP | 2.16 | FDP | 2.38 × 10-1 |
GAP | 1.95 | DHAP | 1.25 × 10-1 |
PGP | 2.71 × 102 | GAP | 1.40 × 10-1 |
3PG | 1.01 | PGP | 3.36 |
2PG | 5.88 | PEP | 6.88 × 10-2 |
PEP | 8.27 × 10-1 | Pyr | 9.45 × 10-2 |
Pyr | 2.45 × 10-1 | ACA | 3.91 × 10-2 |
6PG | 2.06 | EtOH | 7.73 × 10-3 |
Ribu5P | 1.04 × 10 | Glyc | 2.11 × 10-2 |
Xyl5P | 8.08 | ATP | 5.67 × 10-2 |
Sed7P | 9.06 | ADP | 3.36 × 10-2 |
Rib5P | 2.91 | AMP | 1.28 × 10-1 |
E4P | 7.40 | NAD | 3.74 × 10-2 |
G1P | 2.82 | NADH | 1.18 × 10-1 |
MRE | 1.94 × 10 | MRE | 2.77 × 10-1 |