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Table 2 The MLEs of parameters that define circadian rhythms for three different QTL genotypes, the structure of the covariance matrix and the association between the marker and QTL in a natural population, taking the heritability of the assumed QTL as H2 = 0.4. The numbers in parentheses are the square roots of the mean square errors of the MLEs.

From: A computational model for functional mapping of genes that regulate intra-cellular circadian rhythms

Rhythmic Parameters
  AA Aa aa
  Given MLE Given MLE Given MLE
n 1.50 1.52(0.059) 1.40 1.42(0.006) 1.70 1.71(0.060)
m 3.00 3.02(0.015) 2.90 2.90(0.009) 2.80 2.80(0.020)
r M 1.10 1.14(0.052) 1.30 1.34(0.028) 0.90 0.93(0.066)
r P 0.30 0.30(0.009) 0.35 0.35(0.002) 0.40 0.40(0.001)
q M 0.16 0.16(0.003) 0.17 0.17(0.011) 0.18 0.18(0.005)
q P 0.16 0.16(0.004) 0.17 0.17(0.003) 0.18 0.18(0.001)
Matrix Structuring Parameters
  Given MLE     
φ x 0.010 0.010(0.001)     
φ y -0.100 0.095(0.002)     
ψ x 0.100 0.102(0.005)     
ψ y -0.200 0.201(0.006)     
δ x 2 MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaaiiGacqWF0oazdaqhaaWcbaGaemiEaGhabaGaeGOmaidaaaaa@30F0@ 0.307 0.309(0.011)     
δ y 2 MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaaiiGacqWF0oazdaqhaaWcbaGaemyEaKhabaGaeGOmaidaaaaa@30F2@ 0.200 0.204(0.011)     
ρ 0.037 0.038(0.002)     
Genetic Parameters
  Given MLE     
p 0.6 0.601(0.002)     
q 0.6 0.67(0.091)     
D 0.08 0.067(0.022)