|
Forward rate
| |
Reverse rate
| |
Synthesis rate
| |
Degradation rate
| |
Parameter
|
---|
1
|
k
1
|
15
|
k
-4
|
19
|
α
Casp8
|
27
|
μ
DISC
|
48
|
[FasL]0
|
2
|
K
2
|
16
|
k
-6
|
20
|
α
Casp3
|
28
|
μ
Casp8
|
49
|
[FasR]0
|
3
|
k
3
|
17
|
k
-10
|
21
|
α
XIAP
|
29
|
μ
Casp8*
|
50
|
K
DISC
|
4
|
k
4
|
18
|
k
-14
|
22
|
α
BAR
|
30
|
μ
Casp3
|
51
|
[Bax]0
|
5
|
k
5
| | |
23
|
α
Bid
|
31
|
μ
Casp3*
|
52
|
|
6
|
k
6
| | |
24
|
α
Cytc
|
32
|
μ
XIAP
|
53
|
[Apaf]0
|
7
|
k
7
| | |
25
|
α
Smac
|
33
|
μ
Casp3*-XIAP
|
54
|
λ
Apop
|
8
|
k
8
| | |
26
|
α
Casp9
|
34
|
μ
BAR
| | |
9
|
K
9
| | | | |
35
|
μ
Casp8*-BAR
| | |
10
|
k
10
| | | | |
36
|
μ
Bid
| | |
11
|
k
11
| | | | |
37
|
μ
tBid
| | |
12
|
k
12
| | | | |
38
|
| | |
13
|
k
13
| | | | |
39
|
μ
Cytc
| | |
14
|
K
14
| | | | |
40
|
μ
Cytc*
| | |
| | | | | |
41
|
μ
Smac
| | |
| | | | | |
42
|
μ
Smac*
| | |
| | | | | |
43
|
μ
Smac*-XIAP
| | |
| | | | | |
44
|
μ
Apop
| | |
| | | | | |
45
|
μ
Casp9
| | |
| | | | | |
46
|
μ
Casp9*
| | |
| | | | | |
47
|
μ
Casp9*-XIAP
| | |
- The counter on the left hand columns totals the 54 model rates and parameters for the full system. Each subscript for k, α and μ corresponds to its reaction number. The final column are the parameters used in the abstraction of oligomerization kinetics for the three modules.