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Figure 4 | Theoretical Biology and Medical Modelling

Figure 4

From: Theoretical study of the Usutu virus helicase 3D structure, by means of computer-aided homology modelling

Figure 4

The ATP site of the three helicase structures. Left: The Murray Valley Encephalitis helicase is in green color, the Dengue helicase is in orange color, the Usutu helicase model is colored red and the ADP molecule, is showing in CPK format (ADP conformation adopted from the X-ray structure of the Dengue Virus helicase: 2JLS [30]). Right: Zoom-in of the ADP binding site and the conformation of the ADP molecule after the MD simulation color-coded for each receptor. The binding mode of the ADP molecule is exactly the same in the Usutu virus helicase model, as it is in the Murray Valley Encephalitis virus template structure.

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