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Table 3 Pair-wise Atom-Atom RMSD (Ǻ) (checking all automorphisms) of all 5 poses obtained.

From: In silico modeling of the specific inhibitory potential of thiophene-2,3-dihydro-1,5-benzothiazepine against BChE in the formation of β-amyloid plaques associated with Alzheimer's disease

(A) AChE

Poses

Pose 1

Pose 2

Pose 3

Pose 4

Pose 5

RMSDaverage

Pose 1

 

1.394

1.473

6.61

6.471

3.987

Pose 2

1.394

 

6.941

1.473

6.928

4.184

Pose 3

1.473

6.941

 

6.61

1.51

4.134

Pose 4

6.61

1.473

6.61

 

6.874

5.392

Pose 5

6.471

6.928

1.51

6.874

 

5.446

(B) BChE

Poses

Pose 1

Pose 2

Pose 3

Pose 4

Pose 5

RMSD average

Pose 1

 

2.198

7.576

5.99

6.144

5.477

Pose 2

2.198

 

5.995

4.297

1.018

3.377

Pose 3

7.576

5.995

 

4.456

4.578

5.651

Pose 4

5.99

4.297

4.456

 

6.205

5.237

Pose 5

6.144

1.018

4.578

6.205

 

4.486

  1. Automorphisms of selected poses are indicated as italic fonts (See Figure 6 also)