Table 3 Binding motifs found from fREDUCE for keloid versus normal fibroblasts under serum induced condition (P > 1
From: Insights gained from the reverse engineering of gene networks in keloid fibroblasts
Normalization | Parameters | Binding Motif | P-value | Correlation |
|---|---|---|---|---|
MAS 5 (unfiltered) | Length 7 (0 IUPAC) | CCACACA | 2.44 | -0.0376 |
| Â | Â | GGGGCTC | 2.19 | -0.0368 |
| Â | Length 7 (1 IUPAC) | CCACACA | 2.14 | -0.0376 |
| Â | Â | GGVCTC | 1.91 | -0.0386 |
MAS 5 (filtered) | Length 7 (0 IUPAC) | GGGGCTC | 2.28 | -0.0500 |
| Â | Length 7 (1 IUPAC) | GGGGHTC | 2.56 | -0.0573 |
RMA (filtered) | Length 7 (0 IUPAC) | GCGCCA | 2.52 | -0.0432 |
| Â | Â | GTCCCG | 1.46 | -0.0388 |
| Â | Length 7 (1 IUPAC) | GTCVCG | 4.29 | -0.0545 |