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Table 6 Binding motifs found from fREDUCE for steroid treated versus control normal fibroblasts (P > 1

From: Insights gained from the reverse engineering of gene networks in keloid fibroblasts

Normalization

Parameters

Binding Motif

P-value

Correlation

MAS 5

(filtered)

Length 6

(0 IUPAC)

GCCCCC

30.08

-0.119

  

GGAGGG

19.87

-0.0984

  

CTGGGG

10.31

-0.0745

  

TGGGCC

5.00

-0.0573

  

CCCAGA

2.67

-0.0478

  

AGAACG

2.44

0.0468

  

TGGGTG

2.25

-0.0459

  

GCGAAA

1.53

0.0425

  1. Note: P-values are shown as -log10 values.