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Table 8 Binding motifs found from fREDUCE for keloid versus normal fibroblasts under steroid treated condition (P > 1

From: Insights gained from the reverse engineering of gene networks in keloid fibroblasts

Normalization

Parameters

Binding Motif

P-value

Correlation

MAS 5

(unfiltered)

Length 6

(0 IUPAC)

CGCCGC

1.53

0.0314

 

Length 6

(1 IUPAC)

GCGYTT

1.42

-0.0361

RMA

(filtered)

Length 7

(0 IUPAC)

GGGTTG

2.75

0.0441

  

CGTTTT

1.80

-0.0403

  

AGCGAC

1.73

-0.0400

  1. Note: P-values are shown as -log10 values
  2. IUPAC character Y = C/T