Table 1 Functional annotation of the top ten genes selected using Pearson's correlation coefficient and Cosine coefficient
Affy ID | Gene symbol | Entrez gene ID | Gene type | GO processes | Oncology | KEGG pathways |
|---|---|---|---|---|---|---|
202988_s_at | RGS1 | 5996 | Protein coding | Immune response | Â | CXCR4-mediated signaling events, organism-specific biosystem Pathway Interaction Database ID: [cxcr4_pathway] |
208949_s_at | LGALS3 | 3958 | Protein coding | Immune response, cell adhesion, T-cell regulation | Skin cancer, Breast cancer, Colon cancer, Lung cancer, Cervical cancer, Colorectal cancer, Bladder cancer, Thyroid cancer, Pancreatic cancer, prostate cancer, HCC | Immune System, organism-specific biosystem REACTOME ID: [REACT_6900] |
217028_at, 211919_s_at | CXCR4 | 7852 | Protein coding | inflammatory response, response to viral | prostate cancer, kidney cancer, Breast cancer, Lung cancer, bladder cancer, Pancreatic cancer, Colorectal cancer, Thyroide cancer, Qastric cancer | CXCR4-mediated signaling events, organism-specific biosystem Pathway Interaction Database ID: [cxcr4_pathway] |
205798_at | IL7R | 3575 | Protein coding | Immune response | HCV | Primary immunodeficiency KEGG ID: [hsa05340] |
202157_s_at | CELF2 | 10659 | Protein coding | Regulation of heart contraction | Breast cancer, Colon Cancer | mRNA processing, organism-specific biosystemWikiPathways ID: [WP411] |
209606_at | CYTIP | Â | Protein coding | Regulation of cell adhesion | Â | Â |
202992_at | C7 | 730 | Protein coding | Immune response | Hepatoma cell lined | Immune System, organism-specific biosystem REACTOME ID: [REACT_6900] |
211813_x_at, 201893_x_at | DCN | 1634 | Protein coding | Cell growth | Colon Carcinoma, Breast Cancer | (TGF-beta signaling pathway) KEGG ID: [hsa04350] |