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Table 3 Correlation between experimental validations and nodes in the FA/BRCA BNM

From: Fanconi anemia cells with unrepaired DNA damage activate components of the checkpoint recovery process

Process

Nodes in the

Experimental markers

Validated role

References

 

FA/BRCA BNM

used in this study

in the BNM

 

DNA damage

ICL

MMC

FA cells are

[21, 25, 26]

induction

  

hypersensitive

 
   

to ICL inducing

 
   

agents

 

Upstream

FAcore

Non-evaluated

ICL recognition

[14, 16, 17]

FA/BRCA

FANCD2I

 

proteins

 

pathway

NUC1

   
 

NUC2

   

DNA repair

ADD

γH2AX,

ICLs are unhooked

[13, 21]

intermediaries

DSB

CA in metaphase

by FA core-recruited

 
  

spreads

DNA-endonucleases

 
   

that generate a DSB

 
   

and an ADD

 

Downstream

TLS

Non-evaluated

The ADD and DSB

[14, 15, 18, 54]

FA/BRCA

FAHRR

 

are repaired by TLS

 

pathway

  

and FA-dependent

 
   

downstream homologous

 
   

recombination repair,

 
   

respectively. FA cells

 
   

accumulate DSBs

 

Alternative

HRR2

Non-evaluated

FA cells use

[49, 56]

DNA repair

NHEJ

 

alternative DNA

 

pathways

  

repair pathways,

 
   

mainly NHEJ

 
   

HRR2 is a

 
   

criptic repair choice

 

Checkpoint

ATR

Cell cycle arrest

Upon DNA damage

[27, 28, 31]

 

ATM

in G2, pCHK1-S341,

normal and FA

 
 

p53

p21 gene expression,

cells activate

 
  

MYT1, WEE1, p21

the G2/M checkpoint

 
  

proteins

  

Checkpoint

CHKREC

MPM2 mitotic index,

The checkpoint

[83, 84] and this work

recovery

 

cytokinesis block assay,

is inactivated by

 
  

G2/M transcriptional

CHKREC after

 
  

program, WIP1, PLK1,

DNA repair

 
  

CDC25, Aurora A

FA cells seem to have

 
  

proteins

a lower threshold for

 
   

CHKREC activation

 
   

compared to normal cells

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