Extracting DNA words based on the sequence features: non-uniform distribution and integrity

Table 5 Evaluation of function prediction of logistic model with the first-order interaction

Terms	Sensitivity	MAD	Specificity	MAD	Agreement rate	MAD	Share	MAD
Ecoli_l1_GO:0003824	0.739	0.018	0.555	0.020	0.655	0.011	0.717	0.021
Ecoli_l1_GO:0005215	0.821	0.026	0.722	0.012	0.735	0.009	0.500	0.064
Ecoli_l2_GO:0016740	0.582	0.034	0.563	0.014	0.569	0.011	0.535	0.035
Ecoli_l2_GO:0022857	0.937	0.016	0.806	0.009	0.816	0.009	0.312	0.062
Ecoli_l2_GO:0022892	0.780	0.033	0.685	0.010	0.696	0.012	0.550	0.074
Scere_l1_GO:0003824	0.619	0.012	0.706	0.008	0.673	0.007	0.611	0.033
Scere_l1_GO:0005198	0.757	0.019	0.450	0.008	0.471	0.007	0.639	0.071
Scere_l1_GO:0005215	0.185	0.024	0.976	0.002	0.916	0.004	0.098	0.036
Scere_l2_GO:0003735	0.608	0.035	0.742	0.006	0.737	0.007	0.765	0.087
Scere_l2_GO:0005515	0.795	0.025	0.402	0.008	0.430	0.008	0.760	0.031
Scere_l2_GO:0016491	0.723	0.028	0.578	0.009	0.586	0.007	0.452	0.071
Scere_l2_GO:0016740	0.831	0.020	0.514	0.009	0.556	0.011	0.740	0.036
Scere_l2_GO:0016787	0.775	0.023	0.610	0.007	0.633	0.008	0.700	0.034
Scere_l2_GO:0022857	0.805	0.025	0.930	0.005	0.923	0.003	0.231	0.114
Scere_l2_GO:0022892	1.000	0.000	0.735	0.007	0.750	0.007	0.571	0.071
Scere_l2_GO:0060090	0.830	0.018	0.553	0.009	0.574	0.007	0.611	0.082
Scere_l3_GO:0016772	0.285	0.032	0.971	0.003	0.936	0.004	0.024	0.017
Scere_l3_GO:0016788	0.274	0.036	0.982	0.003	0.954	0.004	0.012	0.018
Scere_l3_GO:0016817	0.611	0.032	0.904	0.005	0.890	0.004	0.303	0.036
Scere_l3_GO:0022891	1.000	0.000	0.767	0.006	0.777	0.007	0.429	0.085
Scere_l3_GO:0030533	0.852	0.020	0.552	0.007	0.573	0.008	NA	NA
Scere_l4_GO:0016301	0.935	0.019	0.907	0.004	0.908	0.005	0.121	0.045

ISSN: 1742-4682