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Table 5 Summary of tools used

From: Structural, phylogenetic and docking studies of D-amino acid oxidase activator (DAOA), a candidate schizophrenia gene

Sr.No.

Tools/Databases

Output/Function

1

BioGPS

Expression profiling

2

GeneCards

Expression profiling

3

UniProt

Protein Data

4

MODELLER

Structure prediction

5

AutoDock

Docking Analysis

6

HOPE server

Mutational analysis

7

STRING

Protein-Protein Interactions

8

PubChem

Ligand Retrieval

9

ChemDraw

Ligand Drawing

10

GRAMM-X

Protein-Protein Docking

11

ENSEMBL

Retrieval of Phylogenetic Sequences

12

VMD

Binding interactions of docked protein-ligand complexes

13

PyMOL

Binding interactions of docked protein-protein complexes

14

MEGA

Phylogenetic Analysis

15

Chimera

Visualization, Superimposition, Interaction

16

LigPlot

For interaction