Table 3 Percentages of the patterns for which the hypothesis of equality of “pattern region codon usage (RCU)” and “pattern gene codon usage (GCU)” is rejected, grouped by the specificity of the pattern
From: Dependency of codon usage on protein sequence patterns: a statistical study
Pattern specificity range | Number of valid patterns | Number of patterns with non-equal pattern region codon usage and pattern gene codon usage | Percentages of patterns with non-equal pattern region codon usage and pattern gene codon usage for amino acids |
|---|---|---|---|
[ 9-12) | 12 | 10 | %83.3 |
[ 12-15) | 709 | 529 | %74.6 |
[ 15-18) | 2111 | 1420 | %67.3 |
[ 18-21) | 3792 | 2503 | %66.0 |
[ 21-24) | 3194 | 2112 | %66.1 |
[ 24-27) | 1516 | 992 | %65.4 |
[ 27-30) | 876 | 572 | %65.3 |
[ 30-33) | 444 | 282 | %63.5 |
[ 33-36) | 238 | 148 | %62.2 |
[ 36-39) | 184 | 130 | %70.7 |
[ 39-42) | 185 | 123 | %66.5 |
[ 42-45) | 128 | 69 | %53.9 |
[ 45-48) | 67 | 44 | %65.7 |
[ 48-51) | 57 | 32 | %56.1 |
[ 51-54) | 34 | 19 | %55.9 |
[ 57-60) | 21 | 7 | %33.3 |
[ 60-63) | 12 | 6 | %50.0 |