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Table 2 The 2 ZFNs cleaving >18 bp sequences specifically within the HIV-pol gene

From: Proviral HIV-genome-wide and pol-gene specific Zinc Finger Nucleases: Usability for targeted HIV gene therapy

Zinc Finger Nuclease (ZFN)

Left Fn; triplet- α-Helix

Right Fn; triplet- α-Helix

-target HIV-pol-gene 5'

ZFN-unknown-SP-7-1

  

1063 gTTCTGCCTCAGGGATG GAAGGGGTC a 1089

F1; QGSNLAR;(GAA)

F1; TKSLLAR;(GTC)

1063 c AAGACGGAG TCCCTACCTTCCCCAGt 1089 1

F2; QSTTLKR;(GCA)

F2;RREHLVR;(GGG)

 

F3; RGDNLNR;(GAG)

F3;QDGNLGR;(GAA)

-target HIV-pol-gene 3'

ZFN-unknown-SP-5-1

  

1871 cAACACCACCGCTAG TAAGATTAG t 1895

F1; AATALRR;(GTT)

F1; RSHNLRL;(TAG)

1871 g TTGTGGTGG CGATCATTCTAATCa 1895

F2; EAHHLSR;(GGT)

F2; VRHNLTR;(GAT)

 

F3; IRHHLKR;(GGT)

F3; QQGNLQL;(TAA)