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Table 5 Functional annotation of the top ten genes selected using the hybrid technique

From: Detection of biomarkers for Hepatocellular Carcinoma using a hybrid univariate gene selection methods

Affy ID

Gene symbol

Entrez gene ID

Gene type

GO processes

Oncology

KEGG pathways

208949_s_at

LGALS3

3958

Protein coding

Immune response, cell adhesion, T-cell regulation

Skin cancer, Breast cancer, Colon cancer, Lung cancer, Cervical cancer, Colorectal cancer, Bladder cancer, Thyroid cancer, Pancreatic cancer, prostate cancer, HCC

Immune System, organism-specific biosystem REACTOME ID: [REACT_6900]

202157_s_at

CELF2

10659

Protein coding

Regulation of heart contraction

Breast cancer, Colon Cancer

mRNA processing, organism-specific biosystem WikiPathways ID: [WP411]

209606_at

CYTIP

 

Protein coding

Regulation of cell adhesion

 

202992_at

C7

730

Protein coding

Immune response

Hepatoma cell lined

Immune System, organism-specific biosystem REACTOME ID: [REACT_6900]

211813_x_at, 211896_s_at, 201893_x_at

DCN

1634

Protein coding

Cell growth

Colon Carcinoma, Breast Cancer

(TGF-beta signaling pathway) KEGG ID: [hsa04350]

211919_s_at

CXCR4

7852

Protein coding

inflammatory response, response to viral

HCC, prostate cancer, kidney cancer, Breast cancer, Lung cancer, bladder cancer, Pancreatic cancer, Colorectal cancer, Thyroide cancer, Qastric cancer

CXCR4-mediated signaling events, organism-specific biosystem Pathway Interaction Database ID: [cxcr4_pathway]

214247_s_at

DKK3

   

Lung cancer, prostate cancer, breast cancer, Head and neck cell carcinoma

 

201137_s_at

HLA-DPB1

   

hepatitis C virus (HCV).

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