Parameters | Description | Range | Reference |
---|---|---|---|
I 0 | Basal transcription rate by transcription factors, which are not affected by RA (M/h) | 1.6 × 10−12 − 1.6 × 10−9 | [73] |
k dm | TMR degradation rate (1/h) | 0.256 | [71] |
k trans | Translation rate(1/h) | 1–10,000 | [73] |
k dp | TM degradation rate (1/h) | 0.0845 | [72] |
IC TMR | TMR initial concentration (M) | 1.6 × 10−11 − 1.6 × 10−8 | |
IC TM | TM initial concentration (M) | 1.65 × 10−5 − 2.14 × 10−5 | [40] |
I max | Maximal transcription rate of the TM gene (M/h) | 1.6 × 10−12 − 1.6 × 10−9 | [73] |
k d1 | Equilibrium dissociation constant of RA binding to retinoic acid receptor (M) | 8 × 10−9 | [75] |
k d2 | Equilibrium dissociation constant of DNA-transcription factor complex (M) | 15 × 10−9 | [76] |
[REC1t] | Total concentration (M) of the specific transcription factor which can activate the TM gene transcription | 1 × 10−11 − 1 × 10−6 | Unknown. A large range is used. |